2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : WorkflowManager : Table to R : 0:1820 : Table to R 0:1820 doBeforePreExecution 2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : Table to R 0:1820 has new state: PREEXECUTE 2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : WorkflowManager : Table to R : 0:1820 : Table to R 0:1820 doBeforeExecution 2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : Table to R 0:1820 has new state: EXECUTING 2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : WorkflowFileStoreHandlerRepository : Table to R : 0:1820 : Adding handler b7affc30-7b3f-4d34-a754-f9a8bd757d28 (Table to R 0:1820: ) - 4 in total 2016-07-26 10:09:45,826 : DEBUG : KNIME-Worker-26 : LocalNodeExecutionJob : Table to R : 0:1820 : Table to R 0:1820 Start execute 2016-07-26 10:09:46,323 : DEBUG : KNIME-Worker-26 : Buffer : Table to R : 0:1820 : Opening input stream on file "/data/db/tmp/knime_KnockIn_Tim34194/knime_container_20160725_2301219978657578361.bin.gz", 4 open streams 2016-07-26 10:10:57,218 : DEBUG : KNIME-Worker-26 : Buffer : Table to R : 0:1820 : Closing input stream on "/data/db/tmp/knime_KnockIn_Tim34194/knime_container_20160725_2301219978657578361.bin.gz", 3 remaining 2016-07-26 10:11:10,325 : DEBUG : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : reset 2016-07-26 10:11:10,325 : ERROR : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : Execute failed: Error in R code: "Error: undefined columns selected" 2016-07-26 10:11:10,327 : DEBUG : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : Execute failed: Error in R code: "Error: undefined columns selected" org.knime.r.controller.IRController$RException: Error in R code: "Error: undefined columns selected" at org.knime.r.RSnippetNodeModel.runRScript(RSnippetNodeModel.java:269) at org.knime.r.RSnippetNodeModel.executeSnippet(RSnippetNodeModel.java:209) at org.knime.r.RSnippetNodeModel.executeInternal(RSnippetNodeModel.java:162) at org.knime.r.RSnippetNodeModel.execute(RSnippetNodeModel.java:149) at org.knime.core.node.NodeModel.executeModel(NodeModel.java:566) at org.knime.core.node.Node.invokeFullyNodeModelExecute(Node.java:1146) at org.knime.core.node.Node.execute(Node.java:933) at org.knime.core.node.workflow.NativeNodeContainer.performExecuteNode(NativeNodeContainer.java:556) at org.knime.core.node.exec.LocalNodeExecutionJob.mainExecute(LocalNodeExecutionJob.java:95) at org.knime.core.node.workflow.NodeExecutionJob.internalRun(NodeExecutionJob.java:179) at org.knime.core.node.workflow.NodeExecutionJob.run(NodeExecutionJob.java:110) at org.knime.core.util.ThreadUtils$RunnableWithContextImpl.runWithContext(ThreadUtils.java:328) at org.knime.core.util.ThreadUtils$RunnableWithContext.run(ThreadUtils.java:204) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at org.knime.core.util.ThreadPool$MyFuture.run(ThreadPool.java:123) at org.knime.core.util.ThreadPool$Worker.run(ThreadPool.java:246) 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : WorkflowManager : Table to R : 0:1820 : Table to R 0:1820 doBeforePostExecution 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : Table to R 0:1820 has new state: POSTEXECUTE 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : WorkflowManager : Table to R : 0:1820 : Table to R 0:1820 doAfterExecute - failure 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : reset 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : clean output ports. 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : WorkflowFileStoreHandlerRepository : Table to R : 0:1820 : Removing handler b7affc30-7b3f-4d34-a754-f9a8bd757d28 (Table to R 0:1820: ) - 3 remaining 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : Table to R 0:1820 has new state: IDLE 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : Table to R : Table to R : 0:1820 : Configure succeeded. (Table to R) 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : Table to R 0:1820 has new state: CONFIGURED 2016-07-26 10:11:10,328 : DEBUG : KNIME-Worker-26 : NodeContainer : Table to R : 0:1820 : KnockIn_TimeCourse_2 0 has new state: IDLE