I have today been trying to use a workflow that I set up some time ago, and there seems to be a problem reading in the Scaffold Finder node... Am I going mad, or did this node used to have two out-ports and not just one?!
I am almost certain that I used to be able to return multiple scaffolds for a set of input molecules using this node, and now I only ever seem to be able to return a single MCS...
Any help/advice greatly appreciated!
Actually, it may be that a subsequent R-Group Decomposition node (that uses the MCS as the scaffold) has failed to import... It is a bit difficult to piece together what nodes / connections used to be there(!)
However, assuming that there should have been an R-Group Decomposition (which makes sense for what I was initially doing) - I am now seeing an error where I used to be able to run successfully:
ERROR R-Group Decomposer Execute failed: CMF saver: R-site numbers higher than 7 are not supported
I know others have reported the same error some time ago - as before, any help greatly appreciated : )
Un updated version of Indigo node is now working with up to 32 R-groups correctly. You can try this version from the nightly builds.
Thank you! I have just written a detailed announcement about this new version in the lastest message: http://tech.knime.org/forum/indigo/nightly-builds-new-nodes-and-node-ch…
It would be better to take time to understand the documentation. - Dennis Wong